A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6806403



Internal ID9861160
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:49878209..49879294hg38UCSC Ensembl
Outerchr12:50271992..50273077hg19UCSC Ensembl
Cytoband12q13.12
Allele length
AssemblyAllele length
hg381086
hg191086
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745867
Supporting Variants
SamplesSSM074
Known GenesFAIM2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6806403
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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