A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6802026



Internal ID10206851
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:50405986..50407336hg38UCSC Ensembl
Outerchr3:50443417..50444767hg19UCSC Ensembl
Cytoband3p21.31
Allele length
AssemblyAllele length
hg381351
hg191351
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2725258
Supporting Variants
SamplesSSM073
Known GenesCACNA2D2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6802026
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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