A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6799857



Internal ID9855308
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:6055436..6055894hg38UCSC Ensembl
Outerchr10:6097399..6097857hg19UCSC Ensembl
Cytoband10p15.1
Allele length
AssemblyAllele length
hg38459
hg19459
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731895
Supporting Variants
SamplesSSM072
Known GenesIL2RA
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6799857
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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