A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6797140



Internal ID9851682
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:42909976..42928926hg38UCSC Ensembl
Outerchr19:43414128..43433078hg19UCSC Ensembl
Cytoband19q13.31
Allele length
AssemblyAllele length
hg3818951
hg1918951
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718594, esv2718599, esv2718593, esv2718600, esv2718595
Supporting Variants
SamplesSSM071
Known GenesPSG6, PSG7
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6797140
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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