A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6797013



Internal ID10198197
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:57087227..57087338hg38UCSC Ensembl
Outerchr20:55662283..55662394hg19UCSC Ensembl
Cytoband20q13.31
Allele length
AssemblyAllele length
hg38112
hg19112
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2722592, esv2722589, esv2722590, esv2722591
Supporting Variants
SamplesSSM071
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6797013
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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