A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6794798



Internal ID9657806
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:31409972..31504971hg38UCSC Ensembl
Outerchr6:31377749..31472748hg19UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3895000
hg1995000
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731812, esv2731822
Supporting Variants
SamplesSSM009
Known GenesHCG26, HCP5, MICA, MICB
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6794798
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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