A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6790107



Internal ID9847298
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:138045044..138046073hg38UCSC Ensembl
Outerchr4:138966198..138967227hg19UCSC Ensembl
Cytoband4q28.3
Allele length
AssemblyAllele length
hg381030
hg191030
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2728410
Supporting Variants
SamplesSSM070
Known GenesLINC00616
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6790107
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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