A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6788010



Internal ID9657195
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:160120266..160120807hg38UCSC Ensembl
Outerchr2:160976777..160977318hg19UCSC Ensembl
Cytoband2q24.2
Allele length
AssemblyAllele length
hg38542
hg19542
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2721038
Supporting Variants
SamplesSSM009
Known GenesITGB6
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6788010
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer