A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6787217



Internal ID9846797
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:21195530..21236202hg38UCSC Ensembl
Outerchr9:21195529..21236201hg19UCSC Ensembl
Cytoband9p21.3
Allele length
AssemblyAllele length
hg3840673
hg1940673
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2738277
Supporting Variants
SamplesSSM069
Known GenesIFNA10, IFNA16, IFNA17, IFNA7
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6787217
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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