A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6785950



Internal ID9844151
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:101038964..101040029hg38UCSC Ensembl
Outerchr4:101960121..101961186hg19UCSC Ensembl
Cytoband4q24
Allele length
AssemblyAllele length
hg381066
hg191066
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2728048
Supporting Variants
SamplesSSM069
Known GenesPPP3CA
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6785950
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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