A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6785713



Internal ID10190623
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:179901066..179901417hg38UCSC Ensembl
Outerchr3:179618854..179619205hg19UCSC Ensembl
Cytoband3q26.33
Allele length
AssemblyAllele length
hg38352
hg19352
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2726258
Supporting Variants
SamplesSSM069
Known GenesPEX5L
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6785713
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer