A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6785137



Internal ID10190106
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:196775800..196889165hg38UCSC Ensembl
Outerchr1:196744930..196858295hg19UCSC Ensembl
Cytoband1q31.3
Allele length
AssemblyAllele length
hg38113366
hg19113366
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2721029
Supporting Variants
SamplesSSM069
Known GenesCFHR1, CFHR3, CFHR4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6785137
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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