A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6784550



Internal ID9842155
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:51395437..51395869hg38UCSC Ensembl
Outerchr20:50011974..50012406hg19UCSC Ensembl
Cytoband20q13.2
Allele length
AssemblyAllele length
hg38433
hg19433
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2722510
Supporting Variants
SamplesSSM068
Known GenesNFATC2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6784550
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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