A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6784039



Internal ID9842399
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:1191730..1191838hg38UCSC Ensembl
Outerchr16:1241730..1241838hg19UCSC Ensembl
Cytoband16p13.3
Allele length
AssemblyAllele length
hg38109
hg19109
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2750304, esv2750302
Supporting Variants
SamplesSSM068
Known GenesCACNA1H
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6784039
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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