A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6781539



Internal ID10186275
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:149550694..149552366hg38UCSC Ensembl
Outerchr3:149268481..149270153hg19UCSC Ensembl
Cytoband3q25.1
Allele length
AssemblyAllele length
hg381673
hg191673
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2726042
Supporting Variants
SamplesSSM068
Known GenesWWTR1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6781539
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer