A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6781380



Internal ID9843167
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:232338947..232449725hg38UCSC Ensembl
Outerchr2:233203657..233314435hg19UCSC Ensembl
Cytoband2q37.1
Allele length
AssemblyAllele length
hg38110779
hg19110779
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2721624
Supporting Variants
SamplesSSM068
Known GenesALPP, ALPPL2, DIS3L2, ECEL1P2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6781380
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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