A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6781315



Internal ID9843109
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:156544334..156544670hg38UCSC Ensembl
Outerchr2:157400846..157401182hg19UCSC Ensembl
Cytoband2q24.1
Allele length
AssemblyAllele length
hg38337
hg19337
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2721012
Supporting Variants
SamplesSSM068
Known GenesGPD2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6781315
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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