A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6780134



Internal ID9838915
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:41167775..41168172hg38UCSC Ensembl
Outerchr17:39324027..39324424hg19UCSC Ensembl
Cytoband17q21.2
Allele length
AssemblyAllele length
hg38398
hg19398
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2715919
Supporting Variants
SamplesSSM067
Known GenesKRTAP4-3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6780134
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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