A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6774127



Internal ID10180198
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:7896403..7896828hg38UCSC Ensembl
Outerchr4:7898130..7898555hg19UCSC Ensembl
Cytoband4p16.1
Allele length
AssemblyAllele length
hg38426
hg19426
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2727087
Supporting Variants
SamplesSSM066
Known GenesAFAP1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6774127
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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