A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6773251



Internal ID9831303
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:38962034..38992036hg38UCSC Ensembl
Outerchr22:39358039..39388041hg19UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg3830003
hg1930003
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2724238
Supporting Variants
SamplesSSM065
Known GenesAPOBEC3A, APOBEC3A_B, APOBEC3B, APOBEC3B-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6773251
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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