A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6772597



Internal ID9983611
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:14591282..14593281hg38UCSC Ensembl
Outerchr20:14571928..14573927hg19UCSC Ensembl
Cytoband20p12.1
Allele length
AssemblyAllele length
hg382000
hg192000
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2722209
Supporting Variants
SamplesSSM001
Known GenesMACROD2, MACROD2-IT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6772597
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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