A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6772230



Internal ID10179010
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:52084673..52084849hg38UCSC Ensembl
Outerchr13:52658809..52658985hg19UCSC Ensembl
Cytoband13q14.3
Allele length
AssemblyAllele length
hg38177
hg19177
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2747423, esv2747424
Supporting Variants
SamplesSSM065
Known GenesNEK5
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6772230
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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