A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6768881



Internal ID9827158
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:25054802..25126052hg38UCSC Ensembl
Outerchr16:25066123..25137373hg19UCSC Ensembl
Cytoband16p12.1
Allele length
AssemblyAllele length
hg3871251
hg1971251
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2714121
Supporting Variants
SamplesSSM064
Known GenesLCMT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6768881
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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