A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6768797



Internal ID10173919
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:28590738..28833734hg38UCSC Ensembl
Outerchr15:28835884..29078880hg19UCSC Ensembl
Cytoband15q13.1
Allele length
AssemblyAllele length
hg38242997
hg19242997
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2749506
Supporting Variants
SamplesSSM064
Known GenesGOLGA8M, HERC2P9, LOC100289656, LOC646278, WHAMMP2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6768797
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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