A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6768120



Internal ID9654385
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:110972906..110977397hg38UCSC Ensembl
Outerchr9:113735186..113739677hg19UCSC Ensembl
Cytoband9q31.3
Allele length
AssemblyAllele length
hg384492
hg194492
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2738930
Supporting Variants
SamplesSSM008
Known GenesLPAR1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6768120
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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