A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6756832



Internal ID9655739
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:143899634..144134846hg38UCSC Ensembl
Outerchr4:144820787..145055999hg19UCSC Ensembl
Cytoband4q31.21
Allele length
AssemblyAllele length
hg38235213
hg19235213
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2728476, esv2728480
Supporting Variants
SamplesSSM008
Known GenesGYPA, GYPB, GYPE
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6756832
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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