A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6754156



Internal ID10163067
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:88601743..88602159hg38UCSC Ensembl
Outerchr4:89522894..89523310hg19UCSC Ensembl
Cytoband4q22.1
Allele length
AssemblyAllele length
hg38417
hg19417
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2727952
Supporting Variants
SamplesSSM058
Known GenesHERC3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6754156
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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