A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6750345



Internal ID9811595
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:2805659..2806161hg38UCSC Ensembl
Outerchr19:2805657..2806159hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg38503
hg19503
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717912
Supporting Variants
SamplesSSM056
Known GenesTHOP1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6750345
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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