A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6749800



Internal ID9810026
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:52707115..52707672hg38UCSC Ensembl
Outerchr13:53281250..53281807hg19UCSC Ensembl
Cytoband13q14.3
Allele length
AssemblyAllele length
hg38558
hg19558
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2747426
Supporting Variants
SamplesSSM056
Known GenesLECT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6749800
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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