A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6745896



Internal ID9808871
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:28382511..28383202hg38UCSC Ensembl
Outerchr6:28350288..28350979hg19UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg38692
hg19692
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731752
Supporting Variants
SamplesSSM055
Known GenesZSCAN12
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6745896
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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