A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6742283



Internal ID10151424
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:220052344..220052966hg38UCSC Ensembl
Outerchr1:220225686..220226308hg19UCSC Ensembl
Cytoband1q41
Allele length
AssemblyAllele length
hg38623
hg19623
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2723140
Supporting Variants
SamplesSSM053
Known GenesRNU5F-1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6742283
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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