A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6742257



Internal ID9804761
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:184845571..184851562hg38UCSC Ensembl
Outerchr1:184814705..184820696hg19UCSC Ensembl
Cytoband1q25.3
Allele length
AssemblyAllele length
hg385992
hg195992
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2720206
Supporting Variants
SamplesSSM053
Known GenesFAM129A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6742257
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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