A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6742162



Internal ID9804847
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:37611550..37611926hg38UCSC Ensembl
Outerchr1:38077151..38077598hg19UCSC Ensembl
Cytoband1p34.3
Allele length
AssemblyAllele length
hg38377
hg19448
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2747208
Supporting Variants
SamplesSSM053
Known GenesRSPO1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6742162
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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