A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6740789



Internal ID10149080
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:38449855..38450353hg38UCSC Ensembl
Outerchr10:38738783..38739281hg19UCSC Ensembl
Cytoband10p11.1
Allele length
AssemblyAllele length
hg38499
hg19499
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2735639
Supporting Variants
SamplesSSM052
Known GenesLINC00999
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6740789
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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