A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6739940



Internal ID9803159
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:30239937..30240504hg38UCSC Ensembl
Outerchr6:30207714..30208281hg19UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg38568
hg19568
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731781, esv2731777
Supporting Variants
SamplesSSM052
Known GenesHCG17
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6739940
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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