A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6739859



Internal ID10149918
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:172296543..172297266hg38UCSC Ensembl
Outerchr5:171723547..171724270hg19UCSC Ensembl
Cytoband5q35.1
Allele length
AssemblyAllele length
hg38724
hg19724
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731094
Supporting Variants
SamplesSSM052
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6739859
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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