A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6739021



Internal ID9803986
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:247433548..247434059hg38UCSC Ensembl
Outerchr1:247596850..247597361hg19UCSC Ensembl
Cytoband1q44
Allele length
AssemblyAllele length
hg38512
hg19512
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2727751
Supporting Variants
SamplesSSM052
Known GenesNLRP3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6739021
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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