A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6738469



Internal ID9801418
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:76423326..76423912hg38UCSC Ensembl
Outerchr18:74135282..74135868hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg38587
hg19587
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717388, esv2717394
Supporting Variants
SamplesSSM050
Known GenesZNF516
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6738469
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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