A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6736033



Internal ID9799226
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:89010202..89012919hg38UCSC Ensembl
Outerchr1:89475885..89478602hg19UCSC Ensembl
Cytoband1p22.2
Allele length
AssemblyAllele length
hg382718
hg192718
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2714551
Supporting Variants
SamplesSSM050
Known GenesGBP3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6736033
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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