A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6732055



Internal ID9998232
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:1404509..1405386hg38UCSC Ensembl
OuterchrX:1523402..1524279hg19UCSC Ensembl
CytobandXp22.33
Allele length
AssemblyAllele length
hg38878
hg19878
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2739692, esv2739688, esv2739703, esv2739690, esv2739686
Supporting Variants
SamplesSSM007
Known GenesASMTL, ASMTL-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6732055
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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