A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6729258



Internal ID10139814
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrY:20100748..20106834hg38UCSC Ensembl
OuterchrY:22262634..22268720hg19UCSC Ensembl
CytobandYq11.223
Allele length
AssemblyAllele length
hg386087
hg196087
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2740679, esv2740681, esv2740688, esv2740685
Supporting Variants
SamplesSSM046
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6729258
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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