A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6727931



Internal ID9982256
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:122853214..122853490hg38UCSC Ensembl
Outerchr12:123337761..123338037hg19UCSC Ensembl
Cytoband12q24.31
Allele length
AssemblyAllele length
hg38277
hg19277
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2746501
Supporting Variants
SamplesSSM001
Known GenesHIP1R
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6727931
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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