A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6722438



Internal ID9786990
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:230295554..230394781hg38UCSC Ensembl
Outerchr2:231160269..231259496hg19UCSC Ensembl
Cytoband2q37.1
Allele length
AssemblyAllele length
hg3899228
hg1999228
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2721594
Supporting Variants
SamplesSSM045
Known GenesSP140, SP140L
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6722438
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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