A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6722107



Internal ID9786692
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:161558351..161639789hg38UCSC Ensembl
Outerchr1:161528141..161609579hg19UCSC Ensembl
Cytoband1q23.3
Allele length
AssemblyAllele length
hg3881439
hg1981439
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2741205
Supporting Variants
SamplesSSM045
Known GenesFCGR2C, FCGR3B, HSPA7
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6722107
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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