A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6716780



Internal ID9781897
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:11025973..11052993hg38UCSC Ensembl
Outerchr12:11178572..11205592hg19UCSC Ensembl
Cytoband12p13.2
Allele length
AssemblyAllele length
hg3827021
hg1927021
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745547, esv2745546
Supporting Variants
SamplesSSM043
Known GenesPRH1-PRR4, TAS2R31
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6716780
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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