A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6707083



Internal ID9773170
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:55093351..55094247hg38UCSC Ensembl
Outerchr19:55604719..55605615hg19UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg38897
hg19897
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718946
Supporting Variants
SamplesSSM040
Known GenesPPP1R12C
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6707083
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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