A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6707006



Internal ID9773101
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:15743574..15951077hg38UCSC Ensembl
Outerchr19:15854384..16061887hg19UCSC Ensembl
Cytoband19p13.12
Allele length
AssemblyAllele length
hg38207504
hg19207504
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718244
Supporting Variants
SamplesSSM040
Known GenesCYP4F11, CYP4F2, CYP4F24P, OR10H1, OR10H4, OR10H5, UCA1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6707006
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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