A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6706203



Internal ID9772378
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:11025981..11052995hg38UCSC Ensembl
Outerchr12:11178580..11205594hg19UCSC Ensembl
Cytoband12p13.2
Allele length
AssemblyAllele length
hg3827015
hg1927015
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745547, esv2745546
Supporting Variants
SamplesSSM040
Known GenesPRH1-PRR4, TAS2R31
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6706203
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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