A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6703502



Internal ID9769888
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:5076102..5076543hg38UCSC Ensembl
Outerchr19:5076113..5076554hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg38442
hg19442
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718038
Supporting Variants
SamplesSSM039
Known GenesKDM4B
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6703502
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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