A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6702891



Internal ID10114747
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:84889495..84889833hg38UCSC Ensembl
Outerchr15:85432726..85433064hg19UCSC Ensembl
Cytoband15q25.3
Allele length
AssemblyAllele length
hg38339
hg19339
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2749965
Supporting Variants
SamplesSSM039
Known GenesSLC28A1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6702891
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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